Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840173.1_cds_XP_016507517.1_20631
CDS Infomation

[gene=LOC107825205] [db_xref=GeneID:107825205] [protein=type IV inositol polyphosphate 5-phosphatase 7-like] [protein_id=XP_016507517.1] [location=complement(join(52964..53186,53360..53508,53620..53728,53976..54169,54281..55070,55162..55266,55378..55468,55578..55643,56127..56214,56350..56379))] [gbkey=CDS]
Sequence

ATGAGAGATGAAAATTCCAAGAAAAGCAAGCTCTCCTGGTCGAAGAAACTTGTCAGAAAG
TGGTTCAATATTAAGGGCAAAACTGAAGAATTCCAGTCTGATGAAGTTGTTTATGGAGGT
GGTGATGAGTGGAGAACGAGCATCTCGGAGAGGGAGCATTGCACAATTAAGAAAACCATA
ACAGAGAAATCAAATTCTAGTCGGAGTATGGAGCGTCCTCGACGAGGAAGAGCAGATCTT
GATCACCCTCAGATTATAAATGTACACAACTACAGCGTTTTCGTAGCTACATGGAACGTG
GGTGGAAAATCACCGTCGAGTAATTTGAATCTAGATGATTGGCTTCATTCAGCACCACCT
GCAGATATCTATGTACTTGGATTTCAAGAAATAGTTCCTCTAAATGCTGGTAATATTCTT
GGCGCTGAAGACAATGGCCCTGCCAAGAAATGGCTATCTCTGATCCGGAAGACACTTAAC
AATGGTCCTGGTACTAGTGGAGGCAGCAGCTGCTATACTCCTTCTCCTGTCCCAGATCCA
ATTGCTGAGTGGAATGCTGACTTTGAGGGGTCAAGTAGACGCAAGGCATCATCCTTATTC
CCTCGTCGTTCATTCCAGACTCCTCAATGCTGGAGAATGGAAAATGATCCATCCATCTCA
CAACCTCGCCTTGATAGACGATACAGCGTGTGTGATCGAGTAATTTTTGGACATAGACAG
AGTGATTTTGATCCTAACATAAGATGGGGGCACAGACCTAGTGACTATGGTCCCAGGCCA
AGTGACTATTCATCTAGTCACAGACCGAGCGATTATTCCTCTGGTCACAGACCAAGTGAC
TATTCCTCTGGTCACAGGCCAAGTGATTATTCATCTGGTCATAGGCCAAGTGACTACTCT
TGGGGACAGAGGCCAAGTGATTTCTCCAGATGGGGCTCTTCAGACGAAGATTATGGTCCT
GGAGATTCACCAAGTACTGTTTTGTATTCACCTGTGACGGGTGAAGATGGTAATAGATTG
CCCAGAAATTCAAGATACTGTTTGGTAGCCAGTAAACAGATGGTTGGCATTTTTCTCACT
GTATGGGTGCGAAGTGAGTTGAGGGAGCATGTCCGAAATATGAAAGTATCATGTGTTGGC
AGAGGGTTGATGGGTTACCTTGGAAATAAGGGATCTATTTCAGTAAGTATGCTGTTGCAT
CAGACAAGCTTTTGCTTTGTGTGCACTCACTTAACCTCTGGTCAGAAAGAAGGTGATGAA
TTACGCAGAAATGCAGATGTGATGGAGATCCTAAAGAAAACAAGGTTTCCGCGAGTAAAT
GGTGCGGATGAAGAGAAGTCCCCTGAAACTATTCTTGAACATGACCGAATTATTTGGCTC
GGGGACCTGAATTATCGAATTGCACTCTCGTACCGTTCTGCCAAAGCACTTGTTGAGATG
CAAAACTGGAGGGCATTGTTGGAAAATGACCAGCTGCGTATAGAACAGAGACGAGGTCGG
GTTTTTGTGGGATGGAAGGAAGGAAAGATATATTTCCCACCGACATATAAATATTCAAGG
AATTCAGATAGGTATTCAGGAGATGACATGCACCCAAAAGAGAAACGACGAACACCTGCA
TGGTGTGATCGGATATTGTGGCATGGAGGTGGGCTTCAACAATTATCTTATGTTCGTGGG
GAGTCTAGATTTTCAGATCATAGACCCGTTTCCAGTGTGTTTTGGGCTGAAGTGGAGTCG
GTCCCTAGCAGATTGAGGAAAAGCATGAGTTGTTCAAGCTCAAGAATTGAGGTGGAAGAG
CTGTTGCCATACTCACACGGTTATACAGAACTCTGCTTCTTTTGA

Peptide Sequence

PEP ID

XP_016507517.1
PEP Infomation

PREDICTED: type IV inositol polyphosphate 5-phosphatase 7-like [Nicotiana tabacum]
Sequence

MRDENSKKSKLSWSKKLVRKWFNIKGKTEEFQSDEVVYGGGDEWRTSISEREHCTIKKTI
TEKSNSSRSMERPRRGRADLDHPQIINVHNYSVFVATWNVGGKSPSSNLNLDDWLHSAPP
ADIYVLGFQEIVPLNAGNILGAEDNGPAKKWLSLIRKTLNNGPGTSGGSSCYTPSPVPDP
IAEWNADFEGSSRRKASSLFPRRSFQTPQCWRMENDPSISQPRLDRRYSVCDRVIFGHRQ
SDFDPNIRWGHRPSDYGPRPSDYSSSHRPSDYSSGHRPSDYSSGHRPSDYSSGHRPSDYS
WGQRPSDFSRWGSSDEDYGPGDSPSTVLYSPVTGEDGNRLPRNSRYCLVASKQMVGIFLT
VWVRSELREHVRNMKVSCVGRGLMGYLGNKGSISVSMLLHQTSFCFVCTHLTSGQKEGDE
LRRNADVMEILKKTRFPRVNGADEEKSPETILEHDRIIWLGDLNYRIALSYRSAKALVEM
QNWRALLENDQLRIEQRRGRVFVGWKEGKIYFPPTYKYSRNSDRYSGDDMHPKEKRRTPA
WCDRILWHGGGLQQLSYVRGESRFSDHRPVSSVFWAEVESVPSRLRKSMSCSSSRIEVEE
LLPYSHGYTELCFF

Transcript Sequence

Gene sequence data has not been registered.